Resources

Resources

The Anderson Lab has produced several publicly accessible tools useful for data analysis. They are listed below, crediting the researchers who developed them.

 

SNPMap – An interactive visualization tool for analyzing the individual pattern of polymorphic mutations across 21 clinical isolates of Candida albicans
Created by: Matthew Anderson (anderson.3196@osu.edu)

RNA-Seq_Analysis – Analysis of RNA-Seq for DE Genes in Candida albicans
Created by: Matthew Anderson (anderson.3196@osu.edu)

CAlbicansR – R package to analyze biological datasets in Candida albicans
Created by: Matthew Anderson (anderson.3196@osu.edu)

Detection scripts for analysis of agar filamentation, adhesion, and invasion as well as filamentation in liquid.
Created by: Matthew Dunn (dunn.658@osu.edu)

Code used for data organization and analysis of agar filamentation, adhesion, and invasion as well as filamentation in liquid:
https://code.osu.edu/fillinger.22/MIPAR_FWAIBL_Sorted_Score_Files
https://code.osu.edu/fillinger.22/MIPAR_FWAIBL_Normalized_Figures
https://code.osu.edu/fillinger.22/MIPAR_FWAIBL_R2R_Additive_Correlations
https://code.osu.edu/fillinger.22/mipar_fwaibl-r2r-weighted_phenotypes
Created by: Robert Fillinger (fillinger.22@osu.edu)